MPQC  2.3.1
r12ia_mpiiofile.h
1 //
2 // r12ia_mpiiofile.h
3 //
4 // Copyright (C) 2002 Edward Valeev
5 //
6 // Author: Edward Valeev <edward.valeev@chemistry.gatech.edu>
7 // Maintainer: EV
8 //
9 // This file is part of the SC Toolkit.
10 //
11 // The SC Toolkit is free software; you can redistribute it and/or modify
12 // it under the terms of the GNU Library General Public License as published by
13 // the Free Software Foundation; either version 2, or (at your option)
14 // any later version.
15 //
16 // The SC Toolkit is distributed in the hope that it will be useful,
17 // but WITHOUT ANY WARRANTY; without even the implied warranty of
18 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
19 // GNU Library General Public License for more details.
20 //
21 // You should have received a copy of the GNU Library General Public License
22 // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
23 // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
24 //
25 // The U.S. Government is granted a limited license as per AL 91-7.
26 //
27 
28 #ifndef _chemistry_qc_mbptr12_r12ia_mpiiofile_h
29 #define _chemistry_qc_mbptr12_r12ia_mpiiofile_h
30 
31 #ifdef __GNUC__
32 #pragma interface
33 #endif
34 
35 #define MPICH_SKIP_MPICXX
36 #include <mpi.h>
37 #include <util/ref/ref.h>
38 #include <util/group/memory.h>
39 #include <chemistry/qc/mbptr12/r12ia.h>
40 
41 namespace sc {
42 
44 // R12IntsAcc_MPIIOFile handles transformed integrals stored in a binary
45 // file accessed through MPI-IO. This is an abstract base for MPIIO-based
46 // accumulators using individual and collective I/O.
47 //
48 // The ordering of integrals in blocks is not specified
49 // to avoid having to reorder integrals
50 // Each pair block has size of num_te_types*nbasis1*nbasis2
51 
53 
54  protected:
55  Ref<MemoryGrp> mem_; // The MemoryGrp associated with this accumulator
56  int nproc_;
57  size_t nints_per_block_; // number of integrals per block = num_te_types*nbasis__2_
58  char *filename_;
59  MPI_File datafile_;
60 
61  struct PairBlkInfo {
62  double* ints_[max_num_te_types_]; // blocks corresponding to each operator type
63  int refcount_[max_num_te_types_]; // number of references
64  MPI_Offset offset_; // location in file (in bytes)
65  } *pairblk_;
66 
68  void check_error_code_(int errcod) const;
69  // Initialization tasks common to all constructors
70  void init(bool restart);
71 
73  int ntasks() const { return mem_->n(); }
75  int taskid() const { return mem_->me(); }
76 
77  public:
78  R12IntsAcc_MPIIOFile(Ref<MemoryGrp>& mem, const char *filename, int num_te_types,
79  int ni, int nj, int nx, int ny);
83 
85  void store_pair_block(int i, int j, double *ints);
88  void commit();
90  void activate();
93  void deactivate();
95  void release_pair_block(int i, int j, tbint_type oper_type);
97  bool is_local(int i, int j) const { return true;};
99  bool is_avail(int i, int j) const { return true;};
101  bool has_access(int proc) const { return true;};
103  bool can_restart() const { return true; };
104 
105  // Utility functions
106  int ij_index(int i, int j) const { return i*nj_ + j; };
107 };
108 
110 // R12IntsAcc_MPIIOFile_Ind handles transformed integrals stored in a binary
111 // file accessed through MPI-IO individual I/O routines.
112 //
113 // The ordering of integrals in blocks is not specified
114 // to avoid having to reorder integrals
115 // Each pair block has size of num_te_types*nbasis*nbasis
116 
118 
119  public:
120  R12IntsAcc_MPIIOFile_Ind(Ref<MemoryGrp>& mem, const char *filename, int num_te_types,
121  int ni, int nj, int nx, int ny);
124  void save_data_state(StateOut&);
125 
134  void store_memorygrp(Ref<MemoryGrp>& mem, int ni, const size_t blksize = 0);
136  double* retrieve_pair_block(int i, int j, tbint_type oper_type);
137 };
138 
139 }
140 
141 #endif
142 
143 // Local Variables:
144 // mode: c++
145 // c-file-style: "CLJ"
146 // End:
sc::R12IntsAcc_MPIIOFile::check_error_code_
void check_error_code_(int errcod) const
Utility function to check MPI I/O error codes.
sc::R12IntsAcc_MPIIOFile::commit
void commit()
Commit the content of the accumulator for reading - deactivate the associated MemoryGrp and activate ...
sc::R12IntsAcc_MPIIOFile_Ind::retrieve_pair_block
double * retrieve_pair_block(int i, int j, tbint_type oper_type)
Retrieves an ij pair block of integrals from the file.
sc::R12IntsAcc_MPIIOFile::save_data_state
void save_data_state(StateOut &)
Save the base classes (with save_data_state) and the members in the same order that the StateIn CTOR ...
sc::R12IntsAcc_MPIIOFile
Definition: r12ia_mpiiofile.h:52
sc::Ref
A template class that maintains references counts.
Definition: ref.h:332
sc::R12IntsAcc_MPIIOFile::is_avail
bool is_avail(int i, int j) const
In this implementation blocks are available everywhere.
Definition: r12ia_mpiiofile.h:99
sc::R12IntsAcc_MPIIOFile_Ind::store_memorygrp
void store_memorygrp(Ref< MemoryGrp > &mem, int ni, const size_t blksize=0)
Stores all pair block of integrals held in mem.
sc::R12IntsAcc_MPIIOFile::store_pair_block
void store_pair_block(int i, int j, double *ints)
Stores an ij pair block of integrals to the file.
sc::R12IntsAcc::ny
int ny() const
Rank of index space y.
Definition: r12ia.h:111
sc::R12IntsAcc_MPIIOFile::ntasks
int ntasks() const
total number of tasks
Definition: r12ia_mpiiofile.h:73
sc::R12IntsAcc_MPIIOFile_Ind
Definition: r12ia_mpiiofile.h:117
sc::R12IntsAcc_MPIIOFile::taskid
int taskid() const
ID of this task.
Definition: r12ia_mpiiofile.h:75
sc::R12IntsAcc
R12IntsAcc accumulates transformed (MO) integrals stored as (ijxy) where i, j, x, and,...
Definition: r12ia.h:70
sc::R12IntsAcc::nx
int nx() const
Rank of index space x.
Definition: r12ia.h:109
sc::StateIn
Restores objects that derive from SavableState.
Definition: statein.h:70
sc::R12IntsAcc_MPIIOFile::deactivate
void deactivate()
Done reading content - activate the associated MemoryGrp This is a collective operation.
sc::R12IntsAcc_MPIIOFile::is_local
bool is_local(int i, int j) const
Is this block stored locally?
Definition: r12ia_mpiiofile.h:97
sc::R12IntsAcc_MPIIOFile_Ind::save_data_state
void save_data_state(StateOut &)
Save the base classes (with save_data_state) and the members in the same order that the StateIn CTOR ...
sc::R12IntsAcc_MPIIOFile::can_restart
bool can_restart() const
Can restart MPI-IO-based accumulator.
Definition: r12ia_mpiiofile.h:103
sc::StateOut
Serializes objects that derive from SavableState.
Definition: stateout.h:61
sc::R12IntsAcc::tbint_type
tbint_type
Types of two-body operators that R12IntsAcc understands.
Definition: r12ia.h:99
sc::R12IntsAcc_MPIIOFile::PairBlkInfo
Definition: r12ia_mpiiofile.h:61
sc::R12IntsAcc::num_te_types
int num_te_types() const
The number of types of integrals that are being handled together.
Definition: r12ia.h:103
sc::R12IntsAcc_MPIIOFile::activate
void activate()
Call when ready to read content.
sc::R12IntsAcc_MPIIOFile::release_pair_block
void release_pair_block(int i, int j, tbint_type oper_type)
Releases an ij pair block of integrals.
sc::R12IntsAcc::nj
int nj() const
Rank of index space j.
Definition: r12ia.h:107
sc::R12IntsAcc_MPIIOFile::has_access
bool has_access(int proc) const
Does this task have access to all the integrals?
Definition: r12ia_mpiiofile.h:101
sc::R12IntsAcc::ni
int ni() const
Rank of index space i.
Definition: r12ia.h:105

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